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There are 100% saves everywhere, but they do nothing.
These will.

Save #1:
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Urban
Completely awaken the city.
Go to Stage 6 (Last flower on the right) and light all colorless grass (touch all colorless/grey items including the playground equipment, beams, and fans - light up all glowing flowers, go every possible way on the roadway section (when you get to an exit ramp go straight or right, you will circle around, go the way you didnt go the first time, you will circle around..finally go left to get off - finish stage. and wait about a min or two for the trophy to pop.
Dream
Find and collect all three secret flowers in each primary stage.
Go to Stage 6 (Final Flower)
Follow this guide for the final 3 secret flowers
1. In the second area with the playground set, fly into one of the tallest buildings, with the hole in the roof and find them on the horizontal beam.
2. On the expressway area, follow the road to the under ramp to the underground area where the green flowers will be.
3. In the area with the buildings with giant twisted pieces of metal jutting out of them, just before the ending, behind one of the air conditioning units.
Save #2:
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Nature
Bloom 10,000 flowers.
Go to Stage 6 (Last flower on the right) and just bloom a bunch of flowers. You will have the trophy by it's end.
(Trophy Pops on main screen after you COMPLETE the level)
If for some reason it doesn't pop just play Stage 3 (Last flower on the left) and collect all flowers on it.
It is the windmill stage and has about as much flowers as stage 6 (a little less), and IMO is much more fun and calming to complete. OR you could just replay stage 6 (Or play stage 3 twice) it's really up to you how you get this trophy.

Just know I'm very close to 10K flowers and in 1-3 games depending on the level you choose to play it pops.
Enjoy.